PleioGRiP: genetic risk prediction with pleiotropy

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PleioGRiP: genetic risk prediction with pleiotropy

MOTIVATION Although several studies have used Bayesian classifiers for risk prediction using genome-wide single nucleotide polymorphism (SNP) datasets, no software can efficiently perform these analyses on massive genetic datasets and can accommodate multiple traits. RESULTS We describe the program PleioGRiP that performs a genome-wide Bayesian model search to identify SNPs associated with a ...

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Statistical Methods for Testing Genetic Pleiotropy.

Genetic pleiotropy is when a single gene influences more than one trait. Detecting pleiotropy and understanding its causes can improve the biological understanding of a gene in multiple ways, yet current multivariate methods to evaluate pleiotropy test the null hypothesis that none of the traits are associated with a variant; departures from the null could be driven by just one associated trait...

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ژورنال

عنوان ژورنال: Bioinformatics

سال: 2013

ISSN: 1367-4803,1460-2059

DOI: 10.1093/bioinformatics/btt081